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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3404: 11772 - K13171 SRRM1, SRM160 serine/arginine repetitive matrix protein 1, at 8122 to 9979
11772
mRNA_3405: 11773 - K17922 SNX8, MVP1 sorting nexin-8, at 10068 to 11831
11773
mRNA_3406: 11774 - Hypothetical Protein, at 12464 to 13384
11774
mRNA_3407: 11775 - KOG0498 K+-channel ERG and related proteins, contain PAS/PAC sensor domain, at 13609 to 17494
11775
mRNA_3408: 11776 - K00012 UGDH, ugd UDPglucose 6-dehydrogenase, at 18200 to 20454
11776
Group
Condition
mRNA_3404
mRNA_3405
mRNA_3406
mRNA_3407
mRNA_3408
11772
11773
11774
11775
11776
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.9
-0.0
-0.5
growth on oleic acid
YNB Oleic Acid
-0.7
0.1
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.7
-0.1
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.1
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
-0.1
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.2
-1.0
growth on ricinoleic acid
YNB Glucose
-0.1
-0.2
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.7
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.1
-0.4
growth on oleic acid
YNB Glucose
0.2
-0.0
-0.6
auxotrophy
YNB Glucose 75mM Methionine
0.5
0.1
-0.9
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.4
-0.2
-0.2
auxotrophy
Dropout Complete
0.5
-0.1
-0.4
auxotrophy
YNB Glucose
0.9
-0.2
-0.5
auxotrophy
YNB Glucose 75mM Arginine
0.6
-0.1
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
-0.0
-0.3
ypd buoyancy
40 hrs High Buoyancy
0.1
0.1
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
0.1
0.5
growth on ypd
YPD
1.1
-0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
1.0
0.0
0.0
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