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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3396: 11764 - HMMPfam-Metallo-beta-lactamase superfamily-PF00753,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281, at 577569 to 578953
11764
mRNA_3397: 11765 - K13370 HSD17B8 17beta-estradiol 17-dehydrogenase / 3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+), at 579279 to 580457
11765
mRNA_3398: 11766 - Hypothetical Protein, at 580854 to 581831
11766
mRNA_3399: 11767 - KOG0733 Nuclear AAA ATPase (VCP subfamily), at 582291 to 585718
11767
mRNA_3400: 11768 - KOG3345 Uncharacterized conserved protein, at 585834 to 587522
11768
Group
Condition
mRNA_3396
mRNA_3397
mRNA_3398
mRNA_3399
mRNA_3400
11764
11765
11766
11767
11768
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.4
-0.8
-0.1
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.0
-0.0
0.0
-0.3
growth on ricinoleic acid
YNB Glucose
0.1
-0.2
-0.1
-0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.2
-0.1
-0.1
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.2
0.2
-0.0
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.0
0.2
0.2
-0.6
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.1
-0.0
-0.0
0.2
auxotrophy
Dropout Complete
0.1
-0.0
0.3
0.2
-0.4
auxotrophy
YNB Glucose
-0.0
-0.1
0.1
0.2
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.1
0.3
0.1
-0.1
growth on oleic acid
YNB Oleic Acid
0.1
0.0
0.4
0.2
-0.2
growth on oleic acid
YNB Glucose
0.3
0.0
0.1
0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.0
0.3
0.2
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
-0.4
0.0
0.2
0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
0.3
0.7
0.1
-0.1
growth on ypd
YPD
0.2
0.4
0.3
0.2
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
0.3
0.4
0.2
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
0.5
-0.0
0.1
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
0.1
0.7
0.1
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
-0.1
1.1
0.0
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.3
0.8
0.1
0.3
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