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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3385: 11753 - HMMPfam-Gamma interferon inducible lysosomal thiol reductase (GILT)-PF03227, at 554455 to 555770
11753
mRNA_3386: 11754 - K05756 ARPC3 actin related protein 2/3 complex, subunit 3, at 556119 to 557419
11754
mRNA_3387: 11755 - K01771 plc 1-phosphatidylinositol phosphodiesterase, at 557525 to 558870
11755
mRNA_3388: 11756 - KOG1577 Aldo/keto reductase family proteins, at 559521 to 561050
11756
mRNA_3389: 11757 - K00521 E1.16.1.7 ferric-chelate reductase, at 561833 to 564101
11757
Group
Condition
mRNA_3385
mRNA_3386
mRNA_3387
mRNA_3388
mRNA_3389
11753
11754
11755
11756
11757
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.1
0.6
-1.7
growth on ypd
YPD
-0.3
-0.3
-0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
0.1
-0.6
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.0
-0.1
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.3
0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.3
0.0
0.1
growth on oleic acid
YNB Glucose
-0.0
-0.2
-0.1
-0.1
auxotrophy
YNB Glucose
0.4
-0.0
-0.1
-0.4
auxotrophy
Dropout Complete
0.2
0.1
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.3
0.1
-0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.1
-0.4
0.0
growth on ricinoleic acid
YNB Glucose
0.1
-0.2
0.3
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.3
-0.0
0.2
growth on oleic acid
YNB Oleic Acid
0.0
-0.0
0.2
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.1
-0.1
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.2
0.3
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.1
0.2
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.4
0.0
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.2
0.4
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
0.3
0.3
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.1
0.7
0.3
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