Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3384: 11752 - K00963 UGP2, galU, galF UTP--glucose-1-phosphate uridylyltransferase, at 550974 to 553438 11752 mRNA_3385: 11753 - HMMPfam-Gamma interferon inducible lysosomal thiol reductase (GILT)-PF03227, at 554455 to 555770 11753 mRNA_3386: 11754 - K05756 ARPC3 actin related protein 2/3 complex, subunit 3, at 556119 to 557419 11754 mRNA_3387: 11755 - K01771 plc 1-phosphatidylinositol phosphodiesterase, at 557525 to 558870 11755 mRNA_3388: 11756 - KOG1577 Aldo/keto reductase family proteins, at 559521 to 561050 11756
Group Condition mRNA_3384 mRNA_3385 mRNA_3386 mRNA_3387 mRNA_3388
11752
11753
11754
11755
11756
growth on ypd YPD   -0.3   -0.3 -0.4
ypd buoyancy 40 hrs High Buoyancy   -0.2   -0.3 0.0
growth on oleic acid YNB Glucose   -0.0   -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy   -0.0   -0.3 0.1
ypd buoyancy 40 hrs No Buoyancy Separation   -0.7   -0.1 0.6
ypd buoyancy 40 hrs Median Buoyancy   -0.1   -0.1 0.1
auxotrophy Dropout Complete   0.2   0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate   0.3   -0.3 -0.0
facs on lipid accumulation Sorted High BODIPY Gate   0.3   0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine   0.2   -0.0 -0.1
growth on ricinoleic acid YNB Glucose   0.1   -0.2 0.3
auxotrophy YNB Glucose   0.4   -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine   0.3   0.1 -0.1
growth on oleic acid YNB Oleic Acid   0.0   -0.0 0.2
growth on ricinoleic acid YNB Ricinoleic Acid   0.3   0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid   0.1   0.1 0.2
facs on lipid accumulation Sorted No BODIPY Gate   0.1   0.4 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.2   0.2 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.3   0.2 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.4   0.3 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.2   0.1 0.7
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