Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3381: 11749 - K06027 NSF vesicle-fusing ATPase, at 542498 to 545831 11749 mRNA_3382: 11750 - HMMPfam-Vaculolar membrane protein-PF12400,PRINTS-Proline rich extensin signature-PR01217, at 546099 to 548480 11750 mRNA_3383: 11751 - HMMPfam-BSD domain-PF03909,ProSiteProfiles-BSD domain profile.-PS50858,SMART-domain in transcription factors and synapse-associated proteins-SM00751,SUPERFAMILY--SSF140383, at 548745 to 549848 11751 mRNA_3384: 11752 - K00963 UGP2, galU, galF UTP--glucose-1-phosphate uridylyltransferase, at 550974 to 553438 11752 mRNA_3385: 11753 - HMMPfam-Gamma interferon inducible lysosomal thiol reductase (GILT)-PF03227, at 554455 to 555770 11753
Group Condition mRNA_3381 mRNA_3382 mRNA_3383 mRNA_3384 mRNA_3385
11749
11750
11751
11752
11753
ypd buoyancy 40 hrs No Buoyancy Separation   -0.1 -4.2   -0.7
growth on ricinoleic acid YNB Glucose   0.1 -2.1   0.1
ypd buoyancy 40 hrs Low Buoyancy   -0.2 -1.5   -0.0
auxotrophy YNB Glucose 75mM Arginine   0.6 -2.5   0.3
ypd buoyancy 40 hrs High Buoyancy   0.3 -1.6   -0.2
facs on lipid accumulation Sorted No BODIPY Gate   0.3 -1.3   0.1
growth on ricinoleic acid YNB Ricinoleic Acid   0.3 -1.3   0.3
auxotrophy YNB Glucose 75mM Methionine   0.5 -1.2   0.2
ypd buoyancy 40 hrs Median Buoyancy   0.1 -0.4   -0.1
facs on lipid accumulation Sorted High BODIPY Gate   0.3 -0.8   0.3
growth on ricinoleic acid YNB Methylricinoleic Acid   0.1 -0.1   0.1
growth on oleic acid YNB Glucose   0.2 0.1   -0.0
auxotrophy Dropout Complete   0.4 -0.2   0.2
growth on ypd YPD   0.2 0.5   -0.3
facs on lipid accumulation Sorted Low BODIPY Gate   0.2 0.1   0.3
growth on oleic acid YNB Oleic Acid   0.2 1.1   0.0
auxotrophy YNB Glucose   0.6 1.0   0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.1 1.7   0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.1 2.8   0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.3 2.8   0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.2 3.4   0.4
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