Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3380: 11748 - KOG1650 Predicted K+/H+-antiporter, at 538274 to 541877 11748 mRNA_3381: 11749 - K06027 NSF vesicle-fusing ATPase, at 542498 to 545831 11749 mRNA_3382: 11750 - HMMPfam-Vaculolar membrane protein-PF12400,PRINTS-Proline rich extensin signature-PR01217, at 546099 to 548480 11750 mRNA_3383: 11751 - HMMPfam-BSD domain-PF03909,ProSiteProfiles-BSD domain profile.-PS50858,SMART-domain in transcription factors and synapse-associated proteins-SM00751,SUPERFAMILY--SSF140383, at 548745 to 549848 11751 mRNA_3384: 11752 - K00963 UGP2, galU, galF UTP--glucose-1-phosphate uridylyltransferase, at 550974 to 553438 11752
Group Condition mRNA_3380 mRNA_3381 mRNA_3382 mRNA_3383 mRNA_3384
11748
11749
11750
11751
11752
ypd buoyancy 40 hrs No Buoyancy Separation -0.1   -0.1 -4.2  
auxotrophy YNB Glucose 75mM Arginine -0.2   0.6 -2.5  
growth on ricinoleic acid YNB Glucose -0.1   0.1 -2.1  
ypd buoyancy 40 hrs Low Buoyancy -0.2   -0.2 -1.5  
ypd buoyancy 40 hrs High Buoyancy -0.3   0.3 -1.6  
growth on ricinoleic acid YNB Ricinoleic Acid -0.0   0.3 -1.3  
facs on lipid accumulation Sorted No BODIPY Gate 0.1   0.3 -1.3  
auxotrophy YNB Glucose 75mM Methionine -0.0   0.5 -1.2  
facs on lipid accumulation Sorted High BODIPY Gate -0.0   0.3 -0.8  
ypd buoyancy 40 hrs Median Buoyancy -0.2   0.1 -0.4  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0   0.1 -0.1  
auxotrophy Dropout Complete -0.1   0.4 -0.2  
growth on oleic acid YNB Glucose 0.0   0.2 0.1  
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   0.2 0.1  
growth on ypd YPD -0.0   0.2 0.5  
growth on oleic acid YNB Oleic Acid -0.1   0.2 1.1  
auxotrophy YNB Glucose -0.1   0.6 1.0  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1   0.1 1.7  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2   -0.1 2.8  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3   0.3 2.8  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2   0.2 3.4  
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