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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3380: 11748 - KOG1650 Predicted K+/H+-antiporter, at 538274 to 541877
11748
mRNA_3381: 11749 - K06027 NSF vesicle-fusing ATPase, at 542498 to 545831
11749
mRNA_3382: 11750 - HMMPfam-Vaculolar membrane protein-PF12400,PRINTS-Proline rich extensin signature-PR01217, at 546099 to 548480
11750
mRNA_3383: 11751 - HMMPfam-BSD domain-PF03909,ProSiteProfiles-BSD domain profile.-PS50858,SMART-domain in transcription factors and synapse-associated proteins-SM00751,SUPERFAMILY--SSF140383, at 548745 to 549848
11751
mRNA_3384: 11752 - K00963 UGP2, galU, galF UTP--glucose-1-phosphate uridylyltransferase, at 550974 to 553438
11752
Group
Condition
mRNA_3380
mRNA_3381
mRNA_3382
mRNA_3383
mRNA_3384
11748
11749
11750
11751
11752
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.1
-4.2
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.6
-2.5
growth on ricinoleic acid
YNB Glucose
-0.1
0.1
-2.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.2
-1.5
ypd buoyancy
40 hrs High Buoyancy
-0.3
0.3
-1.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
0.3
-1.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.3
-1.3
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.5
-1.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
0.3
-0.8
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.1
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
0.1
-0.1
auxotrophy
Dropout Complete
-0.1
0.4
-0.2
growth on oleic acid
YNB Glucose
0.0
0.2
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.2
0.1
growth on ypd
YPD
-0.0
0.2
0.5
growth on oleic acid
YNB Oleic Acid
-0.1
0.2
1.1
auxotrophy
YNB Glucose
-0.1
0.6
1.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.1
1.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.1
2.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
0.3
2.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
0.2
3.4
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