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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3376: 11744 - K12864 CTNNBL1 beta-catenin-like protein 1, at 528897 to 531251
11744
mRNA_3377: 11745 - KOG1516 Carboxylesterase and related proteins, at 531386 to 533428
11745
mRNA_3378: 11746 - KOG1516 Carboxylesterase and related proteins, at 533955 to 535983
11746
mRNA_3379: 11747 - Hypothetical Protein, at 537005 to 537944
11747
mRNA_3380: 11748 - KOG1650 Predicted K+/H+-antiporter, at 538274 to 541877
11748
Group
Condition
mRNA_3376
mRNA_3377
mRNA_3378
mRNA_3379
mRNA_3380
11744
11745
11746
11747
11748
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
0.0
-0.0
-0.2
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.2
-0.2
-0.1
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.0
0.2
-0.4
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.2
-0.2
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.0
-0.2
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.2
-0.0
-0.2
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.0
-0.5
0.1
0.1
growth on ypd
YPD
-0.0
-0.1
-0.1
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.3
-0.2
-0.2
-0.2
auxotrophy
YNB Glucose
-0.1
0.3
-0.3
0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.1
-0.1
-0.1
-0.2
auxotrophy
Dropout Complete
-0.1
0.1
-0.0
0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.1
0.3
0.0
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.3
-0.0
0.0
-0.0
growth on ricinoleic acid
YNB Glucose
-0.1
0.2
0.1
0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.1
0.3
0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.1
0.1
0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
0.1
0.3
0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
0.2
0.2
0.1
-0.2
growth on oleic acid
YNB Glucose
0.2
0.2
0.4
-0.0
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.3
0.3
0.4
-0.1
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