Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3373: 11741 - K00390 cysH phosphoadenosine phosphosulfate reductase, at 523671 to 524664 11741 mRNA_3374: 11742 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 525330 to 527850 11742 mRNA_3375: 11743 - Hypothetical Protein, at 528388 to 528831 11743 mRNA_3376: 11744 - K12864 CTNNBL1 beta-catenin-like protein 1, at 528897 to 531251 11744 mRNA_3377: 11745 - KOG1516 Carboxylesterase and related proteins, at 531386 to 533428 11745
Group Condition mRNA_3373 mRNA_3374 mRNA_3375 mRNA_3376 mRNA_3377
11741
11742
11743
11744
11745
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -1.3 -1.5 -0.5 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -1.3 -0.1 -0.0 -0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 -0.2 0.0 -0.6 0.0
growth on ricinoleic acid YNB Glucose -1.7 -0.1 0.2 -0.1 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.8 -0.4 -0.3 0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine -1.5 -0.4 0.3 -0.0 0.3
auxotrophy YNB Glucose -1.2 -0.1 0.2 -0.1 0.3
growth on oleic acid YNB Glucose -1.3 -0.1 0.1 0.2 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.8 0.0 0.1 -0.0
growth on oleic acid YNB Oleic Acid -0.4 0.1 -0.1 -0.1 0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 0.2 -0.0 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 0.3 0.1 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.9 0.2 0.2 0.3 0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 0.1 -0.1 -0.0 0.2
growth on ypd YPD 0.2 -0.5 0.4 -0.0 -0.1
auxotrophy Dropout Complete 0.0 0.1 0.0 -0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 0.1 0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 0.5 0.3 0.5 0.2
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.0 0.5 0.1 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.5 0.1 0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.8 0.2 -0.1 0.4 0.1
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