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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3372: 11740 - K15103 UCP2_3, SLC25A8_9 solute carrier family 25 (mitochondrial uncoupling protein), member 8/9, at 522269 to 523428
11740
mRNA_3373: 11741 - K00390 cysH phosphoadenosine phosphosulfate reductase, at 523671 to 524664
11741
mRNA_3374: 11742 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 525330 to 527850
11742
mRNA_3375: 11743 - Hypothetical Protein, at 528388 to 528831
11743
mRNA_3376: 11744 - K12864 CTNNBL1 beta-catenin-like protein 1, at 528897 to 531251
11744
Group
Condition
mRNA_3372
mRNA_3373
mRNA_3374
mRNA_3375
mRNA_3376
11740
11741
11742
11743
11744
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
-0.9
-1.3
-1.5
-0.5
growth on ricinoleic acid
YNB Glucose
-0.1
-1.7
-0.1
0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-1.0
-0.2
0.0
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-1.3
-0.1
-0.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.8
-0.4
-0.3
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
-0.6
0.3
0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.6
-1.5
-0.4
0.3
-0.0
auxotrophy
YNB Glucose
0.1
-1.2
-0.1
0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.2
0.1
-0.1
-0.0
growth on oleic acid
YNB Glucose
0.5
-1.3
-0.1
0.1
0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.2
-0.2
0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
0.3
-0.8
0.0
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.9
0.2
0.2
0.3
growth on oleic acid
YNB Oleic Acid
0.3
-0.4
0.1
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-0.1
0.1
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.7
0.5
0.3
0.5
growth on ypd
YPD
0.1
0.2
-0.5
0.4
-0.0
auxotrophy
Dropout Complete
0.4
0.0
0.1
0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.1
-0.0
0.5
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
0.1
0.5
0.1
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.8
0.2
-0.1
0.4
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