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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3355: 11723 - K01126 E3.1.4.46, glpQ, ugpQ glycerophosphoryl diester phosphodiesterase, at 482754 to 484525
11723
mRNA_3356: 11724 - K19306 BUD23 18S rRNA (guanine1575-N7)-methyltransferase, at 484974 to 486354
11724
mRNA_3357: 11725 - BLAST dna-directed rna polymerase i subunit rpa43 [Rhod..., at 486537 to 488799
11725
mRNA_3358: 11726 - Hypothetical Protein, at 489592 to 490817
11726
mRNA_3359: 11727 - Hypothetical Protein, at 492217 to 492797
11727
Group
Condition
mRNA_3355
mRNA_3356
mRNA_3357
mRNA_3358
mRNA_3359
11723
11724
11725
11726
11727
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-1.0
-1.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.2
-0.9
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.1
-0.5
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.5
-0.8
-0.3
ypd buoyancy
40 hrs High Buoyancy
0.1
0.1
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.3
-0.5
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.1
0.0
-0.1
growth on ypd
YPD
-0.2
0.5
-0.0
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.2
0.1
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
-0.0
0.1
-0.2
auxotrophy
Dropout Complete
0.2
-0.1
0.1
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
0.1
-0.3
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
-0.2
-0.0
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.4
0.1
-0.0
growth on oleic acid
YNB Oleic Acid
-0.1
-0.0
0.2
0.3
auxotrophy
YNB Glucose
0.3
0.1
0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.4
0.1
-0.2
0.4
growth on ricinoleic acid
YNB Glucose
0.5
-0.1
0.2
0.2
growth on oleic acid
YNB Glucose
0.1
0.4
0.2
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
0.6
-0.0
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
0.4
0.2
-0.1
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