Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_3355: 11723 - K01126 E3.1.4.46, glpQ, ugpQ glycerophosphoryl diester phosphodiesterase, at 482754 to 484525 11723 mRNA_3356: 11724 - K19306 BUD23 18S rRNA (guanine1575-N7)-methyltransferase, at 484974 to 486354 11724 mRNA_3357: 11725 - BLAST dna-directed rna polymerase i subunit rpa43 [Rhod..., at 486537 to 488799 11725 mRNA_3358: 11726 - Hypothetical Protein, at 489592 to 490817 11726 mRNA_3359: 11727 - Hypothetical Protein, at 492217 to 492797 11727
Group Condition mRNA_3355 mRNA_3356 mRNA_3357 mRNA_3358 mRNA_3359
11723
11724
11725
11726
11727
ypd buoyancy 40 hrs No Buoyancy Separation -0.4   -1.0 -1.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   -0.2 -0.9 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1   -0.1 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2   0.5 -0.8 -0.3
ypd buoyancy 40 hrs High Buoyancy 0.1   0.1 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1   0.3 -0.5 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0   0.1 0.0 -0.1
growth on ypd YPD -0.2   0.5 -0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.3   -0.2 0.1 0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.4   -0.0 0.1 -0.2
auxotrophy Dropout Complete 0.2   -0.1 0.1 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.4   0.1 -0.3 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4   -0.2 -0.0 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2   0.4 0.1 -0.0
growth on oleic acid YNB Oleic Acid -0.1   -0.0 0.2 0.3
auxotrophy YNB Glucose 0.3   0.1 0.2 0.1
auxotrophy YNB Glucose 75mM Arginine 0.4   0.1 -0.2 0.4
growth on ricinoleic acid YNB Glucose 0.5   -0.1 0.2 0.2
growth on oleic acid YNB Glucose 0.1   0.4 0.2 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.3   0.6 -0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.4   0.4 0.2 -0.1
remove
mRNA_3355
plot
remove
mRNA_3356
plot
remove
mRNA_3357
remove
mRNA_3358
plot
remove
mRNA_3359
plot