Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3351: 11719 - K12196 VPS4 vacuolar protein-sorting-associated protein 4, at 461320 to 463748 11719 mRNA_3352: 11720 - K06699 PSME4 proteasome activator subunit 4, at 464153 to 471579 11720 mRNA_3353: 11721 - K10352 MYH myosin heavy chain, at 471874 to 478185 11721 mRNA_3354: 11722 - KOG2395 Protein involved in vacuole import and degradation, at 478400 to 482104 11722 mRNA_3355: 11723 - K01126 E3.1.4.46, glpQ, ugpQ glycerophosphoryl diester phosphodiesterase, at 482754 to 484525 11723
Group Condition mRNA_3351 mRNA_3352 mRNA_3353 mRNA_3354 mRNA_3355
11719
11720
11721
11722
11723
auxotrophy Dropout Complete   0.1   -2.5 0.2
growth on ypd YPD   -0.1   -1.5 -0.2
auxotrophy YNB Glucose   0.0   -1.9 0.3
auxotrophy YNB Glucose 75mM Arginine   0.1   -1.9 0.4
auxotrophy YNB Glucose 75mM Methionine   0.1   -1.5 0.3
growth on ricinoleic acid YNB Glucose   0.0   -1.6 0.5
facs on lipid accumulation Sorted No BODIPY Gate   0.1   -1.2 0.4
growth on oleic acid YNB Glucose   0.1   -0.8 0.1
growth on ricinoleic acid YNB Ricinoleic Acid   0.1   -1.0 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid   0.2   -0.8 0.4
facs on lipid accumulation Sorted High BODIPY Gate   0.4   -0.8 0.4
ypd buoyancy 40 hrs High Buoyancy   0.1   -0.2 0.1
ypd buoyancy 40 hrs Low Buoyancy   -0.0   0.6 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate   0.0   0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1   0.6 0.1
growth on oleic acid YNB Oleic Acid   0.9   0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy   0.0   1.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.2   1.3 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1   1.8 0.1
ypd buoyancy 40 hrs No Buoyancy Separation   -0.0   2.4 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.3   1.7 0.1
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