Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3349: 11717 - K13179 DDX18, HAS1 ATP-dependent RNA helicase DDX18/HAS1, at 450209 to 452145 11717 mRNA_3350: 11718 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 452666 to 460645 11718 mRNA_3351: 11719 - K12196 VPS4 vacuolar protein-sorting-associated protein 4, at 461320 to 463748 11719 mRNA_3352: 11720 - K06699 PSME4 proteasome activator subunit 4, at 464153 to 471579 11720 mRNA_3353: 11721 - K10352 MYH myosin heavy chain, at 471874 to 478185 11721
Group Condition mRNA_3349 mRNA_3350 mRNA_3351 mRNA_3352 mRNA_3353
11717
11718
11719
11720
11721
growth on ypd YPD   -0.1   -0.1  
facs on lipid accumulation Sorted Low BODIPY Gate   -0.2   0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.2   0.1  
ypd buoyancy 40 hrs Low Buoyancy   -0.0   -0.0  
ypd buoyancy 40 hrs Median Buoyancy   -0.1   0.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.2   0.1  
growth on oleic acid YNB Glucose   -0.1   0.1  
growth on ricinoleic acid YNB Glucose   -0.1   0.0  
auxotrophy YNB Glucose   -0.0   0.0  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.1   0.2  
facs on lipid accumulation Sorted No BODIPY Gate   -0.0   0.1  
ypd buoyancy 40 hrs No Buoyancy Separation   0.1   -0.0  
auxotrophy Dropout Complete   -0.1   0.1  
auxotrophy YNB Glucose 75mM Methionine   0.0   0.1  
auxotrophy YNB Glucose 75mM Arginine   -0.0   0.1  
ypd buoyancy 40 hrs High Buoyancy   0.0   0.1  
growth on ricinoleic acid YNB Ricinoleic Acid   0.0   0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.0   0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.1   0.3  
facs on lipid accumulation Sorted High BODIPY Gate   -0.1   0.4  
growth on oleic acid YNB Oleic Acid   -0.0   0.9  
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