Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3348: 11716 - K09831 ERG5, CYP61A sterol 22-desaturase, at 447247 to 449563 11716 mRNA_3349: 11717 - K13179 DDX18, HAS1 ATP-dependent RNA helicase DDX18/HAS1, at 450209 to 452145 11717 mRNA_3350: 11718 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 452666 to 460645 11718 mRNA_3351: 11719 - K12196 VPS4 vacuolar protein-sorting-associated protein 4, at 461320 to 463748 11719 mRNA_3352: 11720 - K06699 PSME4 proteasome activator subunit 4, at 464153 to 471579 11720
Group Condition mRNA_3348 mRNA_3349 mRNA_3350 mRNA_3351 mRNA_3352
11716
11717
11718
11719
11720
growth on ypd YPD     -0.1   -0.1
facs on lipid accumulation Sorted Low BODIPY Gate     -0.2   0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy     -0.2   0.1
ypd buoyancy 40 hrs Low Buoyancy     -0.0   -0.0
ypd buoyancy 40 hrs Median Buoyancy     -0.1   0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy     -0.2   0.1
growth on oleic acid YNB Glucose     -0.1   0.1
growth on ricinoleic acid YNB Glucose     -0.1   0.0
auxotrophy YNB Glucose     -0.0   0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -0.1   0.2
facs on lipid accumulation Sorted No BODIPY Gate     -0.0   0.1
ypd buoyancy 40 hrs No Buoyancy Separation     0.1   -0.0
auxotrophy Dropout Complete     -0.1   0.1
auxotrophy YNB Glucose 75mM Methionine     0.0   0.1
auxotrophy YNB Glucose 75mM Arginine     -0.0   0.1
ypd buoyancy 40 hrs High Buoyancy     0.0   0.1
growth on ricinoleic acid YNB Ricinoleic Acid     0.0   0.1
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.0   0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -0.1   0.3
facs on lipid accumulation Sorted High BODIPY Gate     -0.1   0.4
growth on oleic acid YNB Oleic Acid     -0.0   0.9
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