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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3346: 11714 - K19844 BEM2 GTPase-activating protein BEM2, at 440091 to 443147
11714
mRNA_3347: 11715 - PRINTS-Proline rich extensin signature-PR01217, at 444755 to 446622
11715
mRNA_3348: 11716 - K09831 ERG5, CYP61A sterol 22-desaturase, at 447247 to 449563
11716
mRNA_3349: 11717 - K13179 DDX18, HAS1 ATP-dependent RNA helicase DDX18/HAS1, at 450209 to 452145
11717
mRNA_3350: 11718 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 452666 to 460645
11718
Group
Condition
mRNA_3346
mRNA_3347
mRNA_3348
mRNA_3349
mRNA_3350
11714
11715
11716
11717
11718
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.3
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.5
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.3
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.1
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.0
-0.0
auxotrophy
YNB Glucose
0.0
-0.1
-0.0
auxotrophy
Dropout Complete
0.3
-0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.5
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.4
-0.1
-0.1
growth on ypd
YPD
-0.3
0.7
-0.1
growth on ricinoleic acid
YNB Glucose
0.4
-0.1
-0.1
growth on oleic acid
YNB Glucose
0.2
0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.5
-0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.4
0.0
-0.0
growth on oleic acid
YNB Oleic Acid
0.1
0.4
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.4
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.8
-0.1
0.0
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