Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3346: 11714 - K19844 BEM2 GTPase-activating protein BEM2, at 440091 to 443147 11714 mRNA_3347: 11715 - PRINTS-Proline rich extensin signature-PR01217, at 444755 to 446622 11715 mRNA_3348: 11716 - K09831 ERG5, CYP61A sterol 22-desaturase, at 447247 to 449563 11716 mRNA_3349: 11717 - K13179 DDX18, HAS1 ATP-dependent RNA helicase DDX18/HAS1, at 450209 to 452145 11717 mRNA_3350: 11718 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 452666 to 460645 11718
Group Condition mRNA_3346 mRNA_3347 mRNA_3348 mRNA_3349 mRNA_3350
11714
11715
11716
11717
11718
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.3     -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.5     -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.0     -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.2     -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.3     -0.0
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.1     0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.0     -0.0
auxotrophy YNB Glucose 0.0 -0.1     -0.0
auxotrophy Dropout Complete 0.3 -0.3     -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.1     -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5 -0.2     -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 -0.1     -0.1
growth on ypd YPD -0.3 0.7     -0.1
growth on ricinoleic acid YNB Glucose 0.4 -0.1     -0.1
growth on oleic acid YNB Glucose 0.2 0.2     -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.1     -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 -0.2     0.1
auxotrophy YNB Glucose 75mM Arginine 0.4 0.0     -0.0
growth on oleic acid YNB Oleic Acid 0.1 0.4     -0.0
auxotrophy YNB Glucose 75mM Methionine 0.2 0.4     0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.8 -0.1     0.0
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