Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3336: 11704 - K07827 KRAS, KRAS2 GTPase KRas, at 415691 to 416703 11704 mRNA_3337: 11705 - KOG3336 Predicted member of the intramitochondrial sorting protein family, at 417011 to 417925 11705 mRNA_3338: 11706 - KOG3525 Subtilisin-like proprotein convertase, at 419190 to 423102 11706 mRNA_3339: 11707 - KOG2445 Nuclear pore complex component (sc Seh1), at 423436 to 425345 11707 mRNA_3340: 11708 - K20523 SH3YL1 SH3 domain-containing YSC84-like protein 1, at 425589 to 428080 11708
Group Condition mRNA_3336 mRNA_3337 mRNA_3338 mRNA_3339 mRNA_3340
11704
11705
11706
11707
11708
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2   -0.1 -0.1 -0.7
auxotrophy YNB Glucose 75mM Arginine -0.4   -0.3 0.1 -0.4
auxotrophy Dropout Complete -0.2   -0.5 0.2 -0.4
auxotrophy YNB Glucose -0.2   -0.5 0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.1   0.2 -0.4 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0   -0.1 -0.2 -0.6
auxotrophy YNB Glucose 75mM Methionine -0.0   -0.5 0.1 -0.4
growth on oleic acid YNB Glucose -0.2   -0.2 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1   -0.4 -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.3   -0.2 0.1 -0.3
growth on oleic acid YNB Oleic Acid -0.3   -0.1 0.3 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3   0.0 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2   -0.3 0.7 -0.8
growth on ypd YPD -0.3   -0.1 0.0 0.0
ypd buoyancy 40 hrs High Buoyancy 0.0   -0.2 0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1   -0.1 0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.0   0.0 -0.2 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.2   -0.2 0.2 -0.1
growth on ricinoleic acid YNB Glucose 0.1   -0.4 0.6 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0   -0.3 0.7 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1   0.0 0.3 0.0
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