Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3315: 11683 - K18637 AXL2 axial budding pattern protein 2, at 375335 to 379207 11683 mRNA_3316: 11684 - K15223 UAF30, SPP27 upstream activation factor subunit UAF30, at 379574 to 381154 11684 mRNA_3317: 11685 - SUPERFAMILY--SSF52540, at 381412 to 382785 11685 mRNA_3318: 11686 - K14640 SLC20A, PIT solute carrier family 20 (sodium-dependent phosphate transporter), at 383705 to 386213 11686 mRNA_3319: 11687 - KOG3854 SPRT-like metalloprotease, at 386428 to 389154 11687
Group Condition mRNA_3315 mRNA_3316 mRNA_3317 mRNA_3318 mRNA_3319
11683
11684
11685
11686
11687
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -0.2 -0.6 -0.7 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 -0.2 -0.5 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.6 0.1 0.1 -0.2 -0.3
growth on oleic acid YNB Oleic Acid -0.1 -0.4 -0.1 -0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.6 0.0 -0.2 -0.1
auxotrophy Dropout Complete -0.1 -0.1 -0.4 0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.1 -0.3 -0.1 0.0
auxotrophy YNB Glucose 75mM Arginine -0.4 0.1 -0.1 0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 0.4 -0.2 -0.3 0.3
growth on ypd YPD -0.2 -0.2 -0.0 0.1 0.1
auxotrophy YNB Glucose 0.1 -0.1 -0.3 0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.2 0.1 -0.2 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.4 0.1 -0.2 -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.5 -0.0 0.2 -0.4 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 0.0 -0.1 0.2 0.1
growth on ricinoleic acid YNB Glucose 0.4 0.3 -0.3 -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 0.4 -0.2 -0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.0 0.2 0.0 -0.2
growth on oleic acid YNB Glucose 0.3 -0.1 0.1 0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.3 0.1 -0.1 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.8 0.1 -0.2 0.2 0.2
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