Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3310: 11678 - HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906, at 363759 to 365853 11678 mRNA_3311: 11679 - K00134 GAPDH, gapA glyceraldehyde 3-phosphate dehydrogenase, at 365993 to 367448 11679 mRNA_3312: 11680 - Hypothetical Protein, at 367824 to 368675 11680 mRNA_3313: 11681 - K00030 IDH3 isocitrate dehydrogenase (NAD+), at 369892 to 372180 11681 mRNA_3314: 11682 - K00030 IDH3 isocitrate dehydrogenase (NAD+), at 372360 to 374414 11682
Group Condition mRNA_3310 mRNA_3311 mRNA_3312 mRNA_3313 mRNA_3314
11678
11679
11680
11681
11682
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.8 -3.3 -2.2  
growth on ypd YPD -0.1 -0.4 -0.6 -1.7  
auxotrophy Dropout Complete 0.0 -0.1 -0.5 -1.6  
growth on ricinoleic acid YNB Glucose 0.2 0.1 0.5 -2.8  
ypd buoyancy 40 hrs High Buoyancy -0.7 0.1 -0.3 -0.8  
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 -0.1 -1.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.2 0.9 -2.7  
auxotrophy YNB Glucose 75mM Methionine 0.0 0.0 -0.5 -1.1  
auxotrophy YNB Glucose -0.1 0.2 -0.8 -0.7  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 0.1 1.2 -1.5  
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.1 0.1 -1.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 -0.5 0.8 -1.5  
growth on oleic acid YNB Oleic Acid -0.0 -0.3 -0.3 -0.0  
growth on oleic acid YNB Glucose -0.3 -0.1 0.2 -0.5  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.2 0.3 -1.0  
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.4 0.2 -0.3  
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 0.1 -0.3  
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.1 0.5 -1.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.2 0.7 -0.6  
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.2 0.3 0.5  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.3 1.0 -0.0  
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