Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3307: 11675 - K06268 PPP3R, CNB serine/threonine-protein phosphatase 2B regulatory subunit, at 355687 to 356880 11675 mRNA_3308: 11676 - KOG2533 Permease of the major facilitator superfamily, at 357667 to 359935 11676 mRNA_3309: 11677 - HMMPfam-Amidohydrolase family-PF01979,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 360539 to 362421 11677 mRNA_3310: 11678 - HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906, at 363759 to 365853 11678 mRNA_3311: 11679 - K00134 GAPDH, gapA glyceraldehyde 3-phosphate dehydrogenase, at 365993 to 367448 11679
Group Condition mRNA_3307 mRNA_3308 mRNA_3309 mRNA_3310 mRNA_3311
11675
11676
11677
11678
11679
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 -0.3 -0.9 -0.2 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 -0.7 -0.0 0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.5 0.2 0.0 -0.7 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.5 0.0 0.0 -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.1 -0.1 0.0 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.1 -0.2 0.3 0.1
growth on ypd YPD 0.2 0.0 -0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 -0.2 0.2 -0.5 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.5 0.3 0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.9 0.1 -0.1 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.8 -0.3 -0.0 -0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 0.1 0.1 -0.0 0.2
growth on oleic acid YNB Glucose 1.6 -0.2 0.1 -0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine 1.8 0.1 -0.1 -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine 1.6 -0.1 0.1 0.0 0.0
auxotrophy Dropout Complete 1.9 -0.1 -0.0 0.0 -0.1
growth on oleic acid YNB Oleic Acid 2.4 0.0 -0.2 -0.0 -0.3
auxotrophy YNB Glucose 1.9 0.2 0.1 -0.1 0.2
growth on ricinoleic acid YNB Glucose 2.3 -0.4 0.1 0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 3.4 -0.3 -0.4 0.6 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 3.6 -0.7 0.0 0.4 -0.2
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