Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3292: 11660 - KOG1339 Aspartyl protease, at 311013 to 311790 11660 mRNA_3293: 11661 - K01440 PNC1 nicotinamidase, at 318203 to 319692 11661 mRNA_3294: 11662 - K20368 CNIH, ERV14 protein cornichon, at 319706 to 321575 11662 mRNA_3295: 11663 - K14324 SAP18 histone deacetylase complex subunit SAP18, at 321683 to 322724 11663 mRNA_3296: 11664 - Interpro PPR repeat family, at 323054 to 326094 11664
Group Condition mRNA_3292 mRNA_3293 mRNA_3294 mRNA_3295 mRNA_3296
11660
11661
11662
11663
11664
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -0.1   -1.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.3   -0.9  
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.4   -0.8  
growth on oleic acid YNB Glucose 0.2 0.2   -1.1  
auxotrophy Dropout Complete -0.1 0.2   -0.7  
growth on oleic acid YNB Oleic Acid 0.1 -0.3   -0.3  
growth on ricinoleic acid YNB Glucose 0.3 -0.4   -0.4  
auxotrophy YNB Glucose 75mM Arginine -0.1 0.3   -0.7  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.3   0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 -0.2   -0.5  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2   0.1  
auxotrophy YNB Glucose 75mM Methionine 0.1 0.3   -0.6  
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2   0.0  
auxotrophy YNB Glucose -0.0 0.2   -0.3  
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0   -0.1  
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.1   -0.4  
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.1   -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.3   0.4  
growth on ypd YPD 0.0 -0.1   0.2  
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.2   -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.0   0.4  
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