Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3290: 11658 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 304969 to 308540 11658 mRNA_3291: 11659 - BLAST expressed protein [Schizophyllum commune H4-8], at 308905 to 310428 11659 mRNA_3292: 11660 - KOG1339 Aspartyl protease, at 311013 to 311790 11660 mRNA_3293: 11661 - K01440 PNC1 nicotinamidase, at 318203 to 319692 11661 mRNA_3294: 11662 - K20368 CNIH, ERV14 protein cornichon, at 319706 to 321575 11662
Group Condition mRNA_3290 mRNA_3291 mRNA_3292 mRNA_3293 mRNA_3294
11658
11659
11660
11661
11662
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.0 0.2 -0.1 -0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 0.0 -0.3 -0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 0.1 -0.2 -0.2  
auxotrophy YNB Glucose 75mM Arginine -0.6 -0.2 -0.1 0.3  
growth on oleic acid YNB Glucose -0.7 -0.0 0.2 0.2  
growth on ricinoleic acid YNB Glucose -0.5 0.3 0.3 -0.4  
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 0.3 0.3 -0.3  
growth on oleic acid YNB Oleic Acid -0.3 0.4 0.1 -0.3  
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 0.3 -0.1  
growth on ypd YPD 0.1 -0.0 0.0 -0.1  
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.0 0.1 0.3  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.2 0.3 -0.2  
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.3 0.3 -0.4  
auxotrophy Dropout Complete -0.1 0.0 -0.1 0.2  
auxotrophy YNB Glucose -0.3 0.2 -0.0 0.2  
ypd buoyancy 40 hrs High Buoyancy 0.2 0.1 -0.0 -0.2  
facs on lipid accumulation Sorted No BODIPY Gate -0.4 0.2 0.3 0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.3 0.1 0.0  
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.2 -0.0 -0.0  
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.2 0.2 -0.1  
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.0 0.2 0.2  
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