Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3288: 11656 - K03240 EIF2B5 translation initiation factor eIF-2B subunit epsilon, at 298551 to 301179 11656 mRNA_3289: 11657 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 301476 to 302545 11657 mRNA_3290: 11658 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 304969 to 308540 11658 mRNA_3291: 11659 - BLAST expressed protein [Schizophyllum commune H4-8], at 308905 to 310428 11659 mRNA_3292: 11660 - KOG1339 Aspartyl protease, at 311013 to 311790 11660
Group Condition mRNA_3288 mRNA_3289 mRNA_3290 mRNA_3291 mRNA_3292
11656
11657
11658
11659
11660
buoyancy on lipid accumulation 40 hrs High Buoyancy     -0.7 0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy     -1.0 0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine     -0.6 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -0.5 0.1 -0.2
growth on oleic acid YNB Glucose     -0.7 -0.0 0.2
auxotrophy YNB Glucose 75mM Methionine     -0.4 -0.0 0.1
auxotrophy YNB Glucose     -0.3 0.2 -0.0
auxotrophy Dropout Complete     -0.1 0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate     -0.1 -0.1 0.3
growth on ricinoleic acid YNB Glucose     -0.5 0.3 0.3
growth on ypd YPD     0.1 -0.0 0.0
facs on lipid accumulation Sorted No BODIPY Gate     -0.4 0.2 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.3 0.2 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -0.2 0.3 0.1
growth on ricinoleic acid YNB Ricinoleic Acid     -0.4 0.3 0.3
growth on oleic acid YNB Oleic Acid     -0.3 0.4 0.1
ypd buoyancy 40 hrs High Buoyancy     0.2 0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy     0.2 0.2 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation     0.2 0.0 0.2
facs on lipid accumulation Sorted High BODIPY Gate     -0.2 0.3 0.3
ypd buoyancy 40 hrs Low Buoyancy     0.1 0.2 0.2
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