Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3287: 11655 - Hypothetical Protein, at 297990 to 298361 11655 mRNA_3288: 11656 - K03240 EIF2B5 translation initiation factor eIF-2B subunit epsilon, at 298551 to 301179 11656 mRNA_3289: 11657 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 301476 to 302545 11657 mRNA_3290: 11658 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 304969 to 308540 11658 mRNA_3291: 11659 - BLAST expressed protein [Schizophyllum commune H4-8], at 308905 to 310428 11659
Group Condition mRNA_3287 mRNA_3288 mRNA_3289 mRNA_3290 mRNA_3291
11655
11656
11657
11658
11659
facs on lipid accumulation Sorted No BODIPY Gate -2.2     -0.4 0.2
growth on oleic acid YNB Glucose -0.9     -0.7 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.7     -0.6 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6     -1.0 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.4     -0.2 0.3
growth on oleic acid YNB Oleic Acid -1.3     -0.3 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7     -0.5 0.1
auxotrophy Dropout Complete -1.0     -0.1 0.0
growth on ricinoleic acid YNB Ricinoleic Acid -1.0     -0.4 0.3
growth on ricinoleic acid YNB Glucose -0.7     -0.5 0.3
ypd buoyancy 40 hrs No Buoyancy Separation -1.1     0.2 0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.9     -0.2 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6     -0.3 0.2
auxotrophy YNB Glucose -0.4     -0.3 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1     -0.7 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.7     0.1 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1     -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.5     0.2 0.2
auxotrophy YNB Glucose 75mM Methionine 0.5     -0.4 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0     0.2 0.1
growth on ypd YPD 0.6     0.1 -0.0
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