Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3286: 11654 - Hypothetical Protein, at 297200 to 297720 11654 mRNA_3287: 11655 - Hypothetical Protein, at 297990 to 298361 11655 mRNA_3288: 11656 - K03240 EIF2B5 translation initiation factor eIF-2B subunit epsilon, at 298551 to 301179 11656 mRNA_3289: 11657 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 301476 to 302545 11657 mRNA_3290: 11658 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 304969 to 308540 11658
Group Condition mRNA_3286 mRNA_3287 mRNA_3288 mRNA_3289 mRNA_3290
11654
11655
11656
11657
11658
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -2.2     -0.4
growth on ricinoleic acid YNB Glucose -1.4 -0.7     -0.5
growth on oleic acid YNB Oleic Acid -1.0 -1.3     -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -1.5 -1.1     0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 -1.0     -0.4
growth on oleic acid YNB Glucose -0.5 -0.9     -0.7
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.7     -0.6
auxotrophy YNB Glucose -0.6 -0.4     -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.6 -0.7     0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.6     -0.3
auxotrophy Dropout Complete 0.0 -1.0     -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.9     -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.1     -0.1
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.0     0.2
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.5     0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.9 -0.6     -1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.9 -1.4     -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 1.7 -0.7     -0.5
growth on ypd YPD 0.2 0.6     0.1
auxotrophy YNB Glucose 75mM Methionine 1.1 0.5     -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.9 0.1     -0.7
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