Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_3280: 11648 - Hypothetical Protein, at 281870 to 282355 11648 mRNA_3281: 11649 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 282571 to 284691 11649 mRNA_3282: 11650 - KOG0023 Alcohol dehydrogenase, class V, at 285167 to 286436 11650 mRNA_3283: 11651 - K20224 IPO9, RANBP9 importin-9, at 287035 to 291052 11651 mRNA_3284: 11652 - BLAST something about silencing, SAS, complex subunit 4 [Rh..., at 291181 to 293324 11652
Group Condition mRNA_3280 mRNA_3281 mRNA_3282 mRNA_3283 mRNA_3284
11648
11649
11650
11651
11652
auxotrophy Dropout Complete -0.2 0.1 -0.2   -0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.5 -0.3 0.3   -1.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.2 -0.6   0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 -0.1   -0.0
auxotrophy YNB Glucose -0.2 0.2 -0.1   -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 0.1 -0.3   -0.1
growth on ypd YPD 0.1 -0.4 0.1   0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 0.3 -0.2   0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.5 0.1 0.1   -0.6
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.2 0.4   -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.0 0.1   0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.2 -0.4   0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.3 -0.1   0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -0.1 -0.2   0.4
growth on ricinoleic acid YNB Glucose 0.2 0.2 0.2   -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 0.1 0.3   0.2
growth on oleic acid YNB Oleic Acid -0.0 0.2 0.2   0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 -0.3 -0.0   0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.3 -0.2   0.4
growth on oleic acid YNB Glucose 0.1 0.6 0.1   0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.5 -0.3   0.9
remove
mRNA_3280
plot
remove
mRNA_3281
plot
remove
mRNA_3282
remove
mRNA_3283
plot
remove
mRNA_3284
plot