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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3280: 11648 - Hypothetical Protein, at 281870 to 282355
11648
mRNA_3281: 11649 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 282571 to 284691
11649
mRNA_3282: 11650 - KOG0023 Alcohol dehydrogenase, class V, at 285167 to 286436
11650
mRNA_3283: 11651 - K20224 IPO9, RANBP9 importin-9, at 287035 to 291052
11651
mRNA_3284: 11652 - BLAST something about silencing, SAS, complex subunit 4 [Rh..., at 291181 to 293324
11652
Group
Condition
mRNA_3280
mRNA_3281
mRNA_3282
mRNA_3283
mRNA_3284
11648
11649
11650
11651
11652
auxotrophy
Dropout Complete
-0.2
0.1
-0.2
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
-0.3
0.3
-1.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.2
-0.6
0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
-0.1
-0.0
auxotrophy
YNB Glucose
-0.2
0.2
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.1
-0.3
-0.1
growth on ypd
YPD
0.1
-0.4
0.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.3
-0.2
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
0.1
0.1
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.2
0.4
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.0
0.1
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.2
-0.4
0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.3
-0.1
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.1
-0.2
0.4
growth on ricinoleic acid
YNB Glucose
0.2
0.2
0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.1
0.3
0.2
growth on oleic acid
YNB Oleic Acid
-0.0
0.2
0.2
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.6
-0.3
-0.0
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.3
-0.2
0.4
growth on oleic acid
YNB Glucose
0.1
0.6
0.1
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.5
-0.3
0.9
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