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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3279: 11647 - HMMPfam-Beta-glucan synthesis-associated protein (SKN1)-PF03935,SUPERFAMILY--SSF49899, at 278313 to 280858
11647
mRNA_3280: 11648 - Hypothetical Protein, at 281870 to 282355
11648
mRNA_3281: 11649 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 282571 to 284691
11649
mRNA_3282: 11650 - KOG0023 Alcohol dehydrogenase, class V, at 285167 to 286436
11650
mRNA_3283: 11651 - K20224 IPO9, RANBP9 importin-9, at 287035 to 291052
11651
Group
Condition
mRNA_3279
mRNA_3280
mRNA_3281
mRNA_3282
mRNA_3283
11647
11648
11649
11650
11651
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.2
-0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
-0.1
auxotrophy
Dropout Complete
-0.2
0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.1
-0.3
growth on ypd
YPD
0.1
-0.4
0.1
auxotrophy
YNB Glucose
-0.2
0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.2
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.1
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.0
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.6
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.3
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.5
-0.3
growth on oleic acid
YNB Oleic Acid
-0.0
0.2
0.2
growth on ricinoleic acid
YNB Glucose
0.2
0.2
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
-0.3
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
0.1
0.1
growth on oleic acid
YNB Glucose
0.1
0.6
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.2
0.4
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