Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3276: 11644 - BLAST Nuclease PA3 [Grifola frondosa], at 268106 to 268881 11644 mRNA_3277: 11645 - K14835 NOP2 ribosomal RNA methyltransferase Nop2, at 269606 to 272171 11645 mRNA_3278: 11646 - K14152 HIS4 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase / histidinol dehydrogenase, at 272416 to 277579 11646 mRNA_3279: 11647 - HMMPfam-Beta-glucan synthesis-associated protein (SKN1)-PF03935,SUPERFAMILY--SSF49899, at 278313 to 280858 11647 mRNA_3280: 11648 - Hypothetical Protein, at 281870 to 282355 11648
Group Condition mRNA_3276 mRNA_3277 mRNA_3278 mRNA_3279 mRNA_3280
11644
11645
11646
11647
11648
ypd buoyancy 40 hrs No Buoyancy Separation -0.5   -0.1   0.1
ypd buoyancy 40 hrs High Buoyancy -0.0   -0.3   -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0   -0.2   -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.1   -0.1   -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2   0.1   -0.0
growth on oleic acid YNB Glucose 0.0   -0.1   0.1
growth on oleic acid YNB Oleic Acid -0.1   0.2   -0.0
growth on ricinoleic acid YNB Glucose -0.2   0.1   0.2
growth on ypd YPD 0.1   -0.0   0.1
auxotrophy Dropout Complete 0.1   0.3   -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1   0.2   0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0   0.1   0.2
auxotrophy YNB Glucose 75mM Arginine 0.1   0.3   -0.2
auxotrophy YNB Glucose 0.0   0.4   -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1   -0.1   0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0   0.1   0.2
auxotrophy YNB Glucose 75mM Methionine 0.3   0.4   -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   -0.0   0.5
growth on ricinoleic acid YNB Ricinoleic Acid 0.0   0.3   0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.4   0.0   0.5
facs on lipid accumulation Sorted High BODIPY Gate 0.2   0.5   0.3
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