Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3274: 11642 - K00108 betA, CHDH choline dehydrogenase, at 263216 to 265708 11642 mRNA_3275: 11643 - BLAST methyltransferase [Obba rivulosa], at 265766 to 267917 11643 mRNA_3276: 11644 - BLAST Nuclease PA3 [Grifola frondosa], at 268106 to 268881 11644 mRNA_3277: 11645 - K14835 NOP2 ribosomal RNA methyltransferase Nop2, at 269606 to 272171 11645 mRNA_3278: 11646 - K14152 HIS4 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase / histidinol dehydrogenase, at 272416 to 277579 11646
Group Condition mRNA_3274 mRNA_3275 mRNA_3276 mRNA_3277 mRNA_3278
11642
11643
11644
11645
11646
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.0 -0.5   -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.3 0.1   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 0.0   0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.2 -0.0   0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.1 -0.1   0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.3 0.2   0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 0.2   -0.0
growth on oleic acid YNB Glucose 0.0 -0.0 0.0   -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.1 -0.1   0.2
growth on ricinoleic acid YNB Glucose 0.1 0.0 -0.2   0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.1 0.0   0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.2 0.4   0.0
ypd buoyancy 40 hrs High Buoyancy 0.4 0.2 -0.0   -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.1 0.0   -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.1 -0.2   0.1
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.1 0.1   -0.1
auxotrophy Dropout Complete 0.1 0.1 0.1   0.3
auxotrophy YNB Glucose 75mM Arginine 0.0 0.2 0.1   0.3
growth on ypd YPD 0.5 0.1 0.1   -0.0
auxotrophy YNB Glucose 0.1 0.2 0.0   0.4
auxotrophy YNB Glucose 75mM Methionine 0.0 0.2 0.3   0.4
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