Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3256: 11624 - K01681 ACO, acnA aconitate hydratase, at 224964 to 230364 11624 mRNA_3257: 11625 - K13869 SLC7A11 solute carrier family 7 (L-type amino acid transporter), member 11, at 230721 to 232745 11625 mRNA_3258: 11626 - K00791 miaA, TRIT1 tRNA dimethylallyltransferase, at 232790 to 234851 11626 mRNA_3259: 11627 - Hypothetical Protein, at 234995 to 236136 11627 mRNA_3260: 11628 - HMMPfam-Eukaryotic mitochondrial regulator protein-PF12298, at 236332 to 237668 11628
Group Condition mRNA_3256 mRNA_3257 mRNA_3258 mRNA_3259 mRNA_3260
11624
11625
11626
11627
11628
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1   -0.2  
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.0   -0.4  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1   -0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.2   -0.1  
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 0.0   -0.3  
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.0   0.1  
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1   0.1  
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.0   -0.2  
growth on ypd YPD 0.0 0.1   -0.2  
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.0   -0.0  
auxotrophy Dropout Complete -0.0 0.2   0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.0   -0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.0   0.1  
auxotrophy YNB Glucose 0.1 0.0   0.2  
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.3   -0.1  
growth on oleic acid YNB Glucose -0.1 0.1   0.3  
growth on ricinoleic acid YNB Glucose 0.2 0.1   0.4  
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.2   0.4  
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.2   0.5  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.0   0.6  
growth on oleic acid YNB Oleic Acid 0.2 0.1   0.7  
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