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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3240: 11608 - Hypothetical Protein, at 191163 to 192030
11608
mRNA_3241: 11609 - SUPERFAMILY--SSF52047, at 192497 to 194768
11609
mRNA_3242: 11610 - K01814 hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, at 194883 to 196226
11610
mRNA_3243: 11611 - K10752 RBBP4, HAT2, CAF1, MIS16 histone-binding protein RBBP4, at 196612 to 198456
11611
mRNA_3244: 11612 - Hypothetical Protein, at 199306 to 200606
11612
Group
Condition
mRNA_3240
mRNA_3241
mRNA_3242
mRNA_3243
mRNA_3244
11608
11609
11610
11611
11612
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.1
-1.9
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.1
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
-0.1
-0.5
auxotrophy
Dropout Complete
0.1
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.2
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.3
-0.5
growth on oleic acid
YNB Glucose
0.0
0.2
-0.0
growth on ypd
YPD
0.2
-0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.2
0.6
auxotrophy
YNB Glucose
0.4
-0.2
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.1
0.2
growth on ricinoleic acid
YNB Glucose
0.3
0.2
0.0
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.2
0.8
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.2
0.3
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
0.7
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-0.1
1.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
-0.1
2.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.2
1.9
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