Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3240: 11608 - Hypothetical Protein, at 191163 to 192030 11608 mRNA_3241: 11609 - SUPERFAMILY--SSF52047, at 192497 to 194768 11609 mRNA_3242: 11610 - K01814 hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, at 194883 to 196226 11610 mRNA_3243: 11611 - K10752 RBBP4, HAT2, CAF1, MIS16 histone-binding protein RBBP4, at 196612 to 198456 11611 mRNA_3244: 11612 - Hypothetical Protein, at 199306 to 200606 11612
Group Condition mRNA_3240 mRNA_3241 mRNA_3242 mRNA_3243 mRNA_3244
11608
11609
11610
11611
11612
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1     -1.9
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1     -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -0.1     -0.5
auxotrophy Dropout Complete 0.1 -0.2     -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2     -0.2
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.1     -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.2     0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.3     -0.5
growth on oleic acid YNB Glucose 0.0 0.2     -0.0
growth on ypd YPD 0.2 -0.1     0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1     0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2     0.6
auxotrophy YNB Glucose 0.4 -0.2     0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.1     0.2
growth on ricinoleic acid YNB Glucose 0.3 0.2     0.0
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.2     0.8
auxotrophy YNB Glucose 75mM Arginine 0.2 0.2     0.3
growth on oleic acid YNB Oleic Acid 0.1 -0.1     0.7
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.1     1.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.1     2.0
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.2     1.9
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