Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3239: 11607 - K15425 PPP4R2 serine/threonine-protein phosphatase 4 regulatory subunit 2, at 188570 to 189872 11607 mRNA_3240: 11608 - Hypothetical Protein, at 191163 to 192030 11608 mRNA_3241: 11609 - SUPERFAMILY--SSF52047, at 192497 to 194768 11609 mRNA_3242: 11610 - K01814 hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, at 194883 to 196226 11610 mRNA_3243: 11611 - K10752 RBBP4, HAT2, CAF1, MIS16 histone-binding protein RBBP4, at 196612 to 198456 11611
Group Condition mRNA_3239 mRNA_3240 mRNA_3241 mRNA_3242 mRNA_3243
11607
11608
11609
11610
11611
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.2 -0.1    
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.0 -0.1    
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 -0.2    
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.3 -0.1    
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.1 -0.1    
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.0 -0.2    
growth on oleic acid YNB Oleic Acid -0.2 0.1 -0.1    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.1 -0.2    
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.0 -0.2    
growth on oleic acid YNB Glucose -0.2 0.0 0.2    
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 -0.3 -0.1    
auxotrophy YNB Glucose 75mM Methionine 0.2 0.1 -0.1    
growth on ypd YPD 0.1 0.2 -0.1    
auxotrophy Dropout Complete 0.4 0.1 -0.2    
auxotrophy YNB Glucose 0.3 0.4 -0.2    
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.2 0.1    
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.2 0.3    
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.1 0.2    
auxotrophy YNB Glucose 75mM Arginine 0.2 0.2 0.2    
growth on ricinoleic acid YNB Glucose 0.1 0.3 0.2    
facs on lipid accumulation Sorted Low BODIPY Gate 1.2 0.0 -0.1    
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