Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3230: 11598 - HMMPfam-Region of unknown function (DUF2417)-PF10329, at 155480 to 157759 11598 mRNA_3231: 11599 - KOG1430 C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases, at 157802 to 159637 11599 mRNA_3232: 11600 - ProSiteProfiles-BRCT domain profile.-PS50172, at 159953 to 161045 11600 mRNA_3233: 11601 - KOG1339 Aspartyl protease, at 161469 to 163797 11601 mRNA_3234: 11602 - Hypothetical Protein, at 163979 to 166240 11602
Group Condition mRNA_3230 mRNA_3231 mRNA_3232 mRNA_3233 mRNA_3234
11598
11599
11600
11601
11602
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.1 -1.0 -0.9 -0.0
auxotrophy Dropout Complete -0.3 -0.1 -0.8 -0.0 -0.5
growth on oleic acid YNB Glucose -0.0 0.1 -1.3 0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 -0.5 -0.0 -0.3
growth on oleic acid YNB Oleic Acid 0.1 0.0 -0.4 0.1 -0.8
auxotrophy YNB Glucose 75mM Arginine -0.2 0.3 -0.9 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.4 0.6 -0.6 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.4 -0.2 -0.2 -0.9
auxotrophy YNB Glucose -0.2 -0.0 -0.3 0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.2 0.6 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.3 0.5 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.3 1.4 0.1 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.2 1.6 -0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.5 1.5 0.3 -0.3
ypd buoyancy 40 hrs High Buoyancy 0.1 0.3 0.7 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.1 1.2 0.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.3 1.8 -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.2 1.8 0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.2 1.5 -0.1 0.0
growth on ypd YPD 0.3 -0.3 1.8 -0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.3 1.4 -0.2 0.1
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