Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_3229: 11597 - K01113 phoD alkaline phosphatase D, at 152510 to 154539 11597 mRNA_3230: 11598 - HMMPfam-Region of unknown function (DUF2417)-PF10329, at 155480 to 157759 11598 mRNA_3231: 11599 - KOG1430 C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases, at 157802 to 159637 11599 mRNA_3232: 11600 - ProSiteProfiles-BRCT domain profile.-PS50172, at 159953 to 161045 11600 mRNA_3233: 11601 - KOG1339 Aspartyl protease, at 161469 to 163797 11601
Group Condition mRNA_3229 mRNA_3230 mRNA_3231 mRNA_3232 mRNA_3233
11597
11598
11599
11600
11601
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 0.2 -0.1 -1.0 -0.9
growth on oleic acid YNB Glucose -0.2 -0.0 0.1 -1.3 0.0
auxotrophy Dropout Complete -0.1 -0.3 -0.1 -0.8 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 -0.1 -0.5 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.1 -0.4 0.6 -0.6
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.2 0.3 -0.9 -0.1
auxotrophy YNB Glucose 0.0 -0.2 -0.0 -0.3 0.1
growth on oleic acid YNB Oleic Acid 0.1 0.1 0.0 -0.4 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.0 -0.3 0.5 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 0.1 0.4 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.0 -0.2 0.6 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.0 -0.2 1.6 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.2 -0.1 1.2 0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 0.3 0.7 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -0.0 -0.3 1.4 0.1
growth on ypd YPD -0.2 0.3 -0.3 1.8 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.2 -0.3 1.8 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5 -0.1 -0.5 1.5 0.3
growth on ricinoleic acid YNB Glucose 0.3 -0.2 -0.2 1.8 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.1 0.2 1.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.2 0.3 1.4 -0.2
remove
mRNA_3229
plot
remove
mRNA_3230
plot
remove
mRNA_3231
remove
mRNA_3232
plot
remove
mRNA_3233
plot