Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
500 nt
mRNA_3226: 11594 - K05535 MNN2 alpha 1,2-mannosyltransferase, at 140412 to 142107
11594
mRNA_3227: 11595 - K12854 SNRNP200, BRR2 pre-mRNA-splicing helicase BRR2, at 143143 to 150132
11595
mRNA_3228: 11596 - Hypothetical Protein, at 150554 to 152280
11596
mRNA_3229: 11597 - K01113 phoD alkaline phosphatase D, at 152510 to 154539
11597
mRNA_3230: 11598 - HMMPfam-Region of unknown function (DUF2417)-PF10329, at 155480 to 157759
11598
Group
Condition
mRNA_3226
mRNA_3227
mRNA_3228
mRNA_3229
mRNA_3230
11594
11595
11596
11597
11598
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.1
-0.2
-0.2
auxotrophy
Dropout Complete
-0.0
0.1
-0.1
-0.3
growth on oleic acid
YNB Glucose
-0.2
-0.0
-0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
-0.0
0.3
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.3
-0.3
-0.1
growth on oleic acid
YNB Oleic Acid
-0.3
-0.1
0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.0
-0.1
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.1
-0.2
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.2
0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
0.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.0
-0.1
0.0
auxotrophy
YNB Glucose
0.0
0.2
0.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.2
0.0
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
-0.1
-0.0
0.2
growth on ypd
YPD
0.0
0.0
-0.2
0.3
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.2
0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.2
0.1
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
0.1
-0.0
0.2
growth on ricinoleic acid
YNB Glucose
0.5
0.1
0.3
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.2
0.5
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.3
0.4
-0.0
remove
mRNA_3226
plot
remove
mRNA_3227
plot
remove
mRNA_3228
remove
mRNA_3229
plot
remove
mRNA_3230
plot