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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3222: 11590 - Hypothetical Protein, at 136401 to 136739
11590
mRNA_3223: 11591 - Hypothetical Protein, at 136995 to 137729
11591
mRNA_3224: 11592 - BLAST UvdE-domain-containing protein [Gloeophyllum trab..., at 138120 to 138730
11592
mRNA_3225: 11593 - KOG0951 RNA helicase BRR2, DEAD-box superfamily, at 139733 to 140179
11593
mRNA_3226: 11594 - K05535 MNN2 alpha 1,2-mannosyltransferase, at 140412 to 142107
11594
Group
Condition
mRNA_3222
mRNA_3223
mRNA_3224
mRNA_3225
mRNA_3226
11590
11591
11592
11593
11594
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
-0.3
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.4
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
0.0
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.2
0.1
growth on oleic acid
YNB Oleic Acid
-0.1
-0.0
-0.3
auxotrophy
Dropout Complete
0.2
-0.6
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
0.0
-0.1
growth on ypd
YPD
-0.9
0.6
0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.5
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
0.5
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.4
-0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.5
0.2
auxotrophy
YNB Glucose
0.3
-0.3
0.0
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.1
0.2
growth on oleic acid
YNB Glucose
0.1
0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.5
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.3
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
0.3
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
0.0
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
0.6
-0.2
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