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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3220: 11588 - KOG0686 COP9 signalosome, subunit CSN1, at 132017 to 133130
11588
mRNA_3221: 11589 - KOG2533 Permease of the major facilitator superfamily, at 134421 to 136280
11589
mRNA_3222: 11590 - Hypothetical Protein, at 136401 to 136739
11590
mRNA_3223: 11591 - Hypothetical Protein, at 136995 to 137729
11591
mRNA_3224: 11592 - BLAST UvdE-domain-containing protein [Gloeophyllum trab..., at 138120 to 138730
11592
Group
Condition
mRNA_3220
mRNA_3221
mRNA_3222
mRNA_3223
mRNA_3224
11588
11589
11590
11591
11592
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.5
-0.8
growth on ypd
YPD
-0.3
-0.1
-0.9
facs on lipid accumulation
Sorted No BODIPY Gate
-0.9
0.2
-0.3
growth on ricinoleic acid
YNB Glucose
-0.9
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.9
-0.2
0.3
auxotrophy
YNB Glucose
-0.7
-0.4
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.1
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.1
-0.4
auxotrophy
Dropout Complete
-0.1
-0.5
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.6
-0.6
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.3
0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.5
0.5
growth on oleic acid
YNB Glucose
-0.2
-0.2
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.3
0.4
growth on oleic acid
YNB Oleic Acid
0.4
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.4
-0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
0.2
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
0.2
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.1
0.3
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