Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3219: 11587 - HMMPfam-RNase H-PF00075,ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 125577 to 131824 11587 mRNA_3220: 11588 - KOG0686 COP9 signalosome, subunit CSN1, at 132017 to 133130 11588 mRNA_3221: 11589 - KOG2533 Permease of the major facilitator superfamily, at 134421 to 136280 11589 mRNA_3222: 11590 - Hypothetical Protein, at 136401 to 136739 11590 mRNA_3223: 11591 - Hypothetical Protein, at 136995 to 137729 11591
Group Condition mRNA_3219 mRNA_3220 mRNA_3221 mRNA_3222 mRNA_3223
11587
11588
11589
11590
11591
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.4 -0.5   -0.8
growth on ypd YPD 0.1 -0.3 -0.1   -0.9
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.9 0.2   -0.3
growth on ricinoleic acid YNB Glucose 0.1 -0.9 -0.1   -0.1
auxotrophy YNB Glucose 0.0 -0.7 -0.4   0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.9 -0.2   0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.1 -0.1   -0.5
auxotrophy Dropout Complete -0.0 -0.1 -0.5   0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.6 -0.6   -0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.3 0.1   -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.3   0.0
growth on oleic acid YNB Glucose 0.0 -0.2 -0.2   0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.2 -0.2   -0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.3 -0.5   0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.3 -0.4   -0.2
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.2 -0.3   0.4
growth on oleic acid YNB Oleic Acid 0.0 0.4 -0.3   -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 0.4 -0.1   -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 0.3 0.2   0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.0 0.2 0.2   0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.2 0.1   0.3
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