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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3206: 11574 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 85934 to 91274
11574
mRNA_3207: 11575 - Hypothetical Protein, at 91562 to 92218
11575
mRNA_3208: 11576 - HMMPfam-Meiotically up-regulated gene 113-PF13455, at 92724 to 94778
11576
mRNA_3209: 11577 - Hypothetical Protein, at 95744 to 98235
11577
mRNA_3210: 11578 - K03512 POLL DNA polymerase lambda, at 98514 to 102281
11578
Group
Condition
mRNA_3206
mRNA_3207
mRNA_3208
mRNA_3209
mRNA_3210
11574
11575
11576
11577
11578
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
0.0
-0.2
0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.1
-0.3
-0.0
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
0.1
-0.1
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.2
-0.1
-0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.2
0.4
-0.3
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.1
0.3
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
0.3
-0.2
0.1
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.2
0.0
-0.1
-0.3
auxotrophy
Dropout Complete
-0.2
0.3
0.1
-0.4
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.1
0.0
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.1
-0.0
-0.2
0.1
auxotrophy
YNB Glucose
-0.1
0.0
0.0
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.2
0.1
-0.2
-0.0
growth on oleic acid
YNB Glucose
0.1
-0.0
0.0
-0.2
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
0.2
-0.4
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.0
0.1
-0.1
-0.4
0.4
growth on ricinoleic acid
YNB Glucose
0.0
-0.1
0.3
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.3
0.0
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.3
-0.0
-0.1
0.0
growth on ypd
YPD
0.1
0.1
0.0
0.1
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.8
-0.2
-0.0
-0.1
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