Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3199: 11567 - K12881 THOC4, ALY THO complex subunit 4, at 71378 to 73355 11567 mRNA_3200: 11568 - KOG1515 Arylacetamide deacetylase, at 73993 to 76977 11568 mRNA_3201: 11569 - K12175 GPS1, COPS1, CSN1 COP9 signalosome complex subunit 1, at 77177 to 79098 11569 mRNA_3202: 11570 - KOG2533 Permease of the major facilitator superfamily, at 79575 to 81413 11570 mRNA_3203: 11571 - Hypothetical Protein, at 81556 to 81888 11571
Group Condition mRNA_3199 mRNA_3200 mRNA_3201 mRNA_3202 mRNA_3203
11567
11568
11569
11570
11571
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.1 -0.4 -0.2 -0.7
facs on lipid accumulation Sorted High BODIPY Gate   -0.1 -1.4 0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate   0.1 -1.3 -0.0 0.5
ypd buoyancy 40 hrs High Buoyancy   0.0 -0.4 0.2 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid   -0.3 -0.9 0.3 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.1 0.1 0.6 -1.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.1 -0.3 0.3 -0.1
growth on oleic acid YNB Glucose   -0.0 0.1 -0.2 0.2
ypd buoyancy 40 hrs Low Buoyancy   -0.0 0.0 -0.0 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.1 -0.1 0.4 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.0 0.6 0.3 -0.4
growth on ypd YPD   -0.1 0.1 -0.3 0.9
growth on ricinoleic acid YNB Glucose   -0.0 0.1 0.1 0.4
growth on oleic acid YNB Oleic Acid   0.1 -0.1 -0.2 0.9
ypd buoyancy 40 hrs Median Buoyancy   -0.0 0.2 -0.1 0.6
ypd buoyancy 40 hrs No Buoyancy Separation   -0.4 0.9 -0.3 1.2
facs on lipid accumulation Sorted Low BODIPY Gate   0.1 0.7 -0.2 1.0
auxotrophy YNB Glucose 75mM Methionine   0.2 -0.0 0.1 1.7
auxotrophy YNB Glucose 75mM Arginine   0.2 0.3 0.1 2.0
auxotrophy YNB Glucose   0.4 0.1 -0.0 2.2
auxotrophy Dropout Complete   0.2 1.0 0.2 2.3
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