Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3197: 11565 - BLAST similar to An12g07160 [Aspergillus kawachii IFO 4308], at 64392 to 66116 11565 mRNA_3198: 11566 - K20176 SGSM3, MAP small G protein signaling modulator 3, at 66778 to 71121 11566 mRNA_3199: 11567 - K12881 THOC4, ALY THO complex subunit 4, at 71378 to 73355 11567 mRNA_3200: 11568 - KOG1515 Arylacetamide deacetylase, at 73993 to 76977 11568 mRNA_3201: 11569 - K12175 GPS1, COPS1, CSN1 COP9 signalosome complex subunit 1, at 77177 to 79098 11569
Group Condition mRNA_3197 mRNA_3198 mRNA_3199 mRNA_3200 mRNA_3201
11565
11566
11567
11568
11569
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.4   -0.1 -1.4
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.4   0.1 -1.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.2   -0.3 -0.9
ypd buoyancy 40 hrs High Buoyancy -0.0 0.0   0.0 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.1   -0.4 0.9
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.4   -0.0 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.4   0.1 0.7
growth on ypd YPD 0.3 -0.2   -0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.1   -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.0   -0.0 0.2
growth on ricinoleic acid YNB Glucose -0.1 0.3   -0.0 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 0.4   -0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.1   0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1   0.2 0.3
growth on oleic acid YNB Oleic Acid 0.3 0.2   0.1 -0.1
growth on oleic acid YNB Glucose 0.3 0.0   -0.0 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.2   0.1 -0.1
auxotrophy YNB Glucose 0.1 0.0   0.4 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.2   0.0 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7 0.4   0.1 0.1
auxotrophy Dropout Complete 0.3 0.0   0.2 1.0
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