Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3179: 11547 - Hypothetical Protein, at 26940 to 28412 11547 mRNA_3180: 11548 - ProSitePatterns-Zinc finger RanBP2-type signature.-PS01358,SUPERFAMILY--SSF90209, at 29208 to 30655 11548 mRNA_3181: 11549 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 30988 to 32695 11549 mRNA_3182: 11550 - KOG1575 Voltage-gated shaker-like K+ channel, subunit beta/KCNAB, at 33172 to 34723 11550 mRNA_3183: 11551 - HMMPfam-Cohesin loading factor-PF10345, at 34955 to 37755 11551
Group Condition mRNA_3179 mRNA_3180 mRNA_3181 mRNA_3182 mRNA_3183
11547
11548
11549
11550
11551
ypd buoyancy 40 hrs No Buoyancy Separation   -0.3 -0.0 -0.5  
growth on oleic acid YNB Oleic Acid   -0.1 -0.2 -0.1  
ypd buoyancy 40 hrs Median Buoyancy   -0.0 -0.1 -0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.2 0.1 0.0  
growth on oleic acid YNB Glucose   -0.0 0.1 -0.1  
growth on ypd YPD   -0.0 -0.1 0.1  
ypd buoyancy 40 hrs High Buoyancy   -0.1 0.1 -0.1  
ypd buoyancy 40 hrs Low Buoyancy   -0.0 0.2 -0.2  
auxotrophy YNB Glucose 75mM Arginine   -0.1 0.1 0.0  
auxotrophy YNB Glucose   -0.0 -0.0 0.2  
facs on lipid accumulation Sorted Low BODIPY Gate   -0.3 0.4 0.2  
facs on lipid accumulation Sorted No BODIPY Gate   -0.1 0.5 -0.0  
growth on ricinoleic acid YNB Glucose   0.3 0.2 0.0  
growth on ricinoleic acid YNB Methylricinoleic Acid   0.2 0.2 0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.3 0.1 0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.2 0.2 0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.4 0.0 0.2  
auxotrophy YNB Glucose 75mM Methionine   0.1 0.4 0.1  
facs on lipid accumulation Sorted High BODIPY Gate   0.3 0.3 0.1  
growth on ricinoleic acid YNB Ricinoleic Acid   0.4 0.2 0.2  
auxotrophy Dropout Complete   0.2 0.5 0.1  
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