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Cofit
Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3176: 11544 - K17301 COPB1, SEC26 coatomer subunit beta, at 17776 to 21807
11544
mRNA_3177: 11545 - KOG2164 Predicted E3 ubiquitin ligase, at 22085 to 24622
11545
mRNA_3178: 11546 - KOG4561 Uncharacterized conserved protein, contains TBC domain, at 25091 to 26696
11546
mRNA_3179: 11547 - Hypothetical Protein, at 26940 to 28412
11547
mRNA_3180: 11548 - ProSitePatterns-Zinc finger RanBP2-type signature.-PS01358,SUPERFAMILY--SSF90209, at 29208 to 30655
11548
Group
Condition
mRNA_3176
mRNA_3177
mRNA_3178
mRNA_3179
mRNA_3180
11544
11545
11546
11547
11548
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.5
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.3
-0.3
growth on oleic acid
YNB Oleic Acid
-0.4
0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.7
0.2
growth on oleic acid
YNB Glucose
-0.4
0.0
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
0.3
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
0.3
0.4
growth on ypd
YPD
-0.3
0.4
-0.0
auxotrophy
YNB Glucose
-0.2
0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.0
0.1
-0.1
auxotrophy
Dropout Complete
-0.2
0.1
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
0.5
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.1
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.0
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
0.6
0.3
growth on ricinoleic acid
YNB Glucose
-0.2
0.4
0.3
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