Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3149: 11517 - K17917 SNX1_2 sorting nexin-1/2, at 430887 to 434419 11517 mRNA_3150: 11518 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 435030 to 436321 11518 mRNA_3151: 11519 - Hypothetical Protein, at 436481 to 438109 11519 mRNA_3152: 11520 - Interpro PET assembly of cytochrome c oxidase, mitochondrial, at 438780 to 439151 11520 mRNA_3153: 11521 - BLAST serine proline rich protein [Moniliophthora rorer..., at 439382 to 440661 11521
Group Condition mRNA_3149 mRNA_3150 mRNA_3151 mRNA_3152 mRNA_3153
11517
11518
11519
11520
11521
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 -0.1 0.3 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 -0.0 0.0 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.3 0.2 -0.1 -0.3 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.0 -0.2 -0.3 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.1 0.0 -0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.2 -0.2 -0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.2 0.2 -0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.1 -0.0 0.5 -0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.0 0.0 -0.4 0.2
growth on ricinoleic acid YNB Glucose -0.0 0.1 0.1 0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.1 -0.0 0.1 0.0
auxotrophy YNB Glucose -0.2 0.3 -0.1 -0.0 -0.1
growth on oleic acid YNB Oleic Acid -0.1 0.2 -0.1 0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.1 -0.0 0.1 -0.1
growth on oleic acid YNB Glucose -0.1 0.3 -0.0 0.0 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.1 0.0 0.4 -0.5
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.0 -0.1 0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.1 0.0 0.0 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.2 -0.1 0.6 -0.3
auxotrophy Dropout Complete -0.1 0.2 -0.0 -0.1 0.2
growth on ypd YPD -0.1 0.1 0.1 0.2 -0.0
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