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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3146: 11514 - K11273 DDX11, CHL1, CTF1 chromosome transmission fidelity protein 1, at 423793 to 427312
11514
mRNA_3147: 11515 - Hypothetical Protein, at 427660 to 428214
11515
mRNA_3148: 11516 - BLAST putative fungal-specific transcription factor [Tricho..., at 429143 to 430117
11516
mRNA_3149: 11517 - K17917 SNX1_2 sorting nexin-1/2, at 430887 to 434419
11517
mRNA_3150: 11518 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 435030 to 436321
11518
Group
Condition
mRNA_3146
mRNA_3147
mRNA_3148
mRNA_3149
mRNA_3150
11514
11515
11516
11517
11518
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.2
-0.3
-0.2
-0.1
growth on oleic acid
YNB Glucose
-0.1
-0.6
-0.2
-0.1
0.3
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.7
-0.0
0.0
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.2
-0.5
0.1
-0.2
growth on oleic acid
YNB Oleic Acid
0.0
-0.6
-0.1
-0.1
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.0
0.1
-0.0
-0.1
auxotrophy
Dropout Complete
-0.1
-0.6
0.3
-0.1
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.5
0.1
-0.2
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.2
0.1
0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
-0.1
0.2
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.0
-0.2
0.2
-0.3
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.1
0.0
0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.3
-0.3
-0.2
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.1
0.1
0.0
-0.0
auxotrophy
YNB Glucose
0.2
-0.4
0.2
-0.2
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.1
0.2
-0.1
-0.0
growth on ricinoleic acid
YNB Glucose
0.2
-0.2
0.3
-0.0
0.1
growth on ypd
YPD
0.3
0.1
0.1
-0.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.4
0.2
-0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
-0.2
0.3
0.0
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.2
0.4
0.1
0.2
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