Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3143: 11511 - K10133 TP53I3 tumor protein p53-inducible protein 3, at 415939 to 417358 11511 mRNA_3144: 11512 - Hypothetical Protein, at 417526 to 421368 11512 mRNA_3145: 11513 - HMMPfam-haloacid dehalogenase-like hydrolase-PF08282,SUPERFAMILY--SSF56784,TIGRFAM-Cof-subfamily Cof-like hydrolase-TIGR00099,TIGRFAM-HAD-SF-IIB HAD hydrolase, family IIB-TIGR01484, at 422365 to 423654 11513 mRNA_3146: 11514 - K11273 DDX11, CHL1, CTF1 chromosome transmission fidelity protein 1, at 423793 to 427312 11514 mRNA_3147: 11515 - Hypothetical Protein, at 427660 to 428214 11515
Group Condition mRNA_3143 mRNA_3144 mRNA_3145 mRNA_3146 mRNA_3147
11511
11512
11513
11514
11515
growth on oleic acid YNB Glucose -0.0 -0.1 -0.1 -0.1 -0.6
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 -0.2 0.1 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.2 -0.1 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.0 -0.2 0.0 -0.1
auxotrophy Dropout Complete -0.0 0.1 -0.3 -0.1 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.3 -0.3 -0.3 -0.0
growth on oleic acid YNB Oleic Acid 0.0 -0.1 -0.1 0.0 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.1 -0.1 0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 -0.1 0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 -0.2 0.0 -0.2
auxotrophy YNB Glucose 0.1 0.0 -0.2 0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.0 -0.1 0.2 -0.2
growth on ricinoleic acid YNB Glucose -0.3 0.0 -0.0 0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 0.1 -0.0 0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.1 -0.2 0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.3 0.1 -0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.2 0.0 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 -0.0 -0.1 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0 -0.0 -0.1 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.2 -0.1 -0.1 0.1
growth on ypd YPD -0.0 0.2 -0.0 0.3 0.1
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