Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3117: 11485 - KOG1110 Putative steroid membrane receptor Hpr6.6/25-Dx, at 357751 to 358834 11485 mRNA_3118: 11486 - K01881 PARS, proS prolyl-tRNA synthetase, at 359416 to 362125 11486 mRNA_3119: 11487 - BLAST Spindle pole body protein pcp1 [Hypsizygus marmoreus], at 362785 to 367104 11487 mRNA_3120: 11488 - BLAST Protein cps3 [Rhizoctonia solani], at 367437 to 369368 11488 mRNA_3121: 11489 - KOG1039 Predicted E3 ubiquitin ligase, at 369378 to 369678 11489
Group Condition mRNA_3117 mRNA_3118 mRNA_3119 mRNA_3120 mRNA_3121
11485
11486
11487
11488
11489
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.1 -0.1 -0.2 -1.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.1 0.1 -0.2 -1.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 0.3 -0.0 -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.3 -0.2 -0.3 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.1 0.1 -0.5 0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.1 -0.0 -0.2 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 0.3 0.1 0.3 -0.8
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.0 0.1 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.1 -0.0 0.3 -0.7
growth on oleic acid YNB Glucose 0.2 -0.0 0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.3 -0.1 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.0 0.0 0.0 0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.0 -0.0 0.2 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.1 0.0 0.1 -0.0
growth on oleic acid YNB Oleic Acid 0.1 -0.1 0.0 -0.1 0.4
auxotrophy Dropout Complete -0.1 -0.2 0.1 -0.1 0.7
auxotrophy YNB Glucose 0.1 -0.2 -0.1 -0.1 0.7
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.1 -0.2 1.3
growth on ypd YPD -0.1 -0.0 -0.0 -0.1 1.3
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.1 -0.1 -0.1 1.3
growth on ricinoleic acid YNB Glucose 0.5 0.1 -0.1 0.1 0.4
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