Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3109: 11477 - K13172 SRRM2, SRM300 serine/arginine repetitive matrix protein 2, at 344614 to 345945 11477 mRNA_3110: 11478 - K14558 PWP2, UTP1 periodic tryptophan protein 2, at 346099 to 349205 11478 mRNA_3111: 11479 - K09788 prpF 2-methylaconitate isomerase, at 349482 to 350899 11479 mRNA_3112: 11480 - Hypothetical Protein, at 351079 to 352331 11480 mRNA_3113: 11481 - K11361 SPT20, ADA5 transcription factor SPT20, at 352715 to 353874 11481
Group Condition mRNA_3109 mRNA_3110 mRNA_3111 mRNA_3112 mRNA_3113
11477
11478
11479
11480
11481
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.1 -0.4 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -0.3 -0.1 -0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3 -0.1 -0.1 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.1 -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.0 -0.1 -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 -0.0 -0.2 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.1 0.0 -0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.0 -0.0 0.1 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 -0.2 -0.3 0.0 -0.2
growth on oleic acid YNB Glucose 0.1 -0.2 0.1 -0.1 -0.0
growth on ypd YPD 0.4 0.1 0.1 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.0 -0.1 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.2 -0.2 0.1 0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.0 0.1 0.6 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 -0.1 -0.1 -0.0 0.0
auxotrophy YNB Glucose 0.1 -0.0 -0.1 0.5 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.0 -0.1 0.1 0.4
growth on ricinoleic acid YNB Glucose 0.4 -0.2 0.2 0.1 0.0
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.0 0.1 0.5 -0.2
auxotrophy Dropout Complete 0.2 0.0 0.2 0.5 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 -0.0 0.2 0.4 0.2
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