Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3106: 11474 - BLAST potential peroxisomal matrix Pex8 protein [Pseudo..., at 336211 to 338758 11474 mRNA_3107: 11475 - K11412 SIRT2, SIR2L2 NAD-dependent deacetylase sirtuin 2, at 339155 to 340730 11475 mRNA_3108: 11476 - KOG2203 GTP-binding protein, at 340842 to 344399 11476 mRNA_3109: 11477 - K13172 SRRM2, SRM300 serine/arginine repetitive matrix protein 2, at 344614 to 345945 11477 mRNA_3110: 11478 - K14558 PWP2, UTP1 periodic tryptophan protein 2, at 346099 to 349205 11478
Group Condition mRNA_3106 mRNA_3107 mRNA_3108 mRNA_3109 mRNA_3110
11474
11475
11476
11477
11478
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 -2.0 -0.2 -0.1 0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2 0.0 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.4 0.1 0.3 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.0 0.2 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.4 0.1 0.4 -0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.0 -0.1 0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.1 -0.0 -0.1 -0.1
growth on oleic acid YNB Glucose -0.1 0.1 -0.1 0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.3 0.1 0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.2 -0.1 0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.0 0.2 0.4 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.4 -0.1 0.1 -0.0
growth on ypd YPD -0.1 0.1 -0.1 0.4 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.3 0.1 0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 0.0 0.2 0.0 -0.1
growth on oleic acid YNB Oleic Acid 0.2 0.4 0.0 -0.0 -0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.1 0.1 0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.0 0.8 0.0 0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.1 0.8 0.1 -0.0 -0.0
auxotrophy YNB Glucose -0.0 0.9 0.0 0.1 -0.0
auxotrophy Dropout Complete -0.1 1.0 0.0 0.2 0.0
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