Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3101: 11469 - K01490 AMPD AMP deaminase, at 321739 to 325524 11469 mRNA_3102: 11470 - BLAST mannoprotein [Rhizoctonia solani AG-1 IA], at 325747 to 328243 11470 mRNA_3103: 11471 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 328830 to 331254 11471 mRNA_3104: 11472 - HMMPfam-Uncharacterized conserved protein (DUF2156)-PF09924, at 331820 to 333279 11472 mRNA_3105: 11473 - KOG1515 Arylacetamide deacetylase, at 334494 to 336059 11473
Group Condition mRNA_3101 mRNA_3102 mRNA_3103 mRNA_3104 mRNA_3105
11469
11470
11471
11472
11473
growth on oleic acid YNB Oleic Acid -0.0 -0.1 -0.2 -0.2 -0.0
auxotrophy YNB Glucose 0.0 -0.1 -0.1 0.2 -0.5
growth on oleic acid YNB Glucose -0.1 -0.2 -0.2 -0.1 -0.1
growth on ypd YPD -0.1 -0.0 -0.3 0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 0.0 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 -0.1 -0.2 0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.0 0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 0.2 -0.0 0.1 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 0.1 -0.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.2 0.2 -0.3 0.5
growth on ricinoleic acid YNB Glucose -0.2 -0.1 0.1 -0.0 0.3
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.1 0.1 0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.1 0.1 0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 0.1 0.1 0.2 -0.1
auxotrophy Dropout Complete 0.2 -0.1 0.1 0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -0.0 0.1 0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.1 0.2 0.0 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.1 -0.2 0.2 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.0 0.0 -0.2 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.1 0.0 0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.0 0.2 0.1 -0.1
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