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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3099: 11467 - Hypothetical Protein, at 315457 to 316238
11467
mRNA_3100: 11468 - Hypothetical Protein, at 318961 to 319575
11468
mRNA_3101: 11469 - K01490 AMPD AMP deaminase, at 321739 to 325524
11469
mRNA_3102: 11470 - BLAST mannoprotein [Rhizoctonia solani AG-1 IA], at 325747 to 328243
11470
mRNA_3103: 11471 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 328830 to 331254
11471
Group
Condition
mRNA_3099
mRNA_3100
mRNA_3101
mRNA_3102
mRNA_3103
11467
11468
11469
11470
11471
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
-0.5
-0.0
0.2
-0.0
growth on oleic acid
YNB Oleic Acid
-0.1
-0.3
-0.0
-0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.0
-0.1
-0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.2
-0.1
-0.2
0.2
growth on oleic acid
YNB Glucose
0.4
-0.1
-0.1
-0.2
-0.2
growth on ypd
YPD
0.3
-0.1
-0.1
-0.0
-0.3
growth on ricinoleic acid
YNB Glucose
0.2
0.1
-0.2
-0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
0.1
-0.1
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.0
-0.1
-0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.2
-0.1
0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.3
0.2
0.0
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.1
0.1
-0.1
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
-0.2
0.2
0.0
0.0
auxotrophy
YNB Glucose
0.4
0.4
0.0
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
0.2
0.2
-0.1
-0.2
auxotrophy
Dropout Complete
0.3
0.2
0.2
-0.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.6
0.2
0.0
-0.1
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.3
0.1
-0.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
0.2
0.0
0.1
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.6
0.0
0.0
0.1
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.6
0.2
0.0
-0.0
0.1
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