Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3095: 11463 - K01739 metB cystathionine gamma-synthase, at 307460 to 310020 11463 mRNA_3096: 11464 - K17262 TBCB, CKAP1, ALF1 tubulin-folding cofactor B, at 310272 to 311367 11464 mRNA_3097: 11465 - K00591 COQ3 polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase, at 311599 to 312739 11465 mRNA_3098: 11466 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 312938 to 315396 11466 mRNA_3099: 11467 - Hypothetical Protein, at 315457 to 316238 11467
Group Condition mRNA_3095 mRNA_3096 mRNA_3097 mRNA_3098 mRNA_3099
11463
11464
11465
11466
11467
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 -0.0 -0.1 -0.1 -0.8
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.2 -0.4 -0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 -0.3 -0.2 0.2
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.0 -0.2 -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 0.1 -0.4 -0.0 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.1 -0.3 0.1 0.6
auxotrophy YNB Glucose 0.1 -0.1 -0.4 -0.1 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.1 0.1 -0.2 0.4
auxotrophy Dropout Complete -0.1 -0.0 -0.1 -0.1 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 -0.2 0.1 0.5
growth on ypd YPD 0.1 0.3 -0.3 -0.3 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.0 -0.1 -0.1 0.6
growth on oleic acid YNB Oleic Acid 0.1 -0.0 -0.2 0.4 -0.1
growth on oleic acid YNB Glucose -0.0 -0.0 -0.4 0.3 0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.1 -0.2 0.3 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.2 -0.3 0.1 0.4
growth on ricinoleic acid YNB Glucose 0.1 0.1 -0.1 0.2 0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 0.0 -0.2 -0.0 0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.1 0.2 0.2 0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.2 -0.3 0.3 0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.2 0.1 0.4 0.2
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